Cambridge Healthtech Institute’s 17th Annual

GPCR-Based Drug Discovery

Targeting G Protein-Coupled Receptors for New Therapeutic Options

October 18 - 19, 2022 EDT

G protein-coupled receptors (GPCRs) are the largest class of molecules targeted by biopharmaceutical drugs because GPCRs play roles in many physiological processes and can be modulated by a wide range of chemical or biologic agents due to their cell-surface location. Cambridge Healthtech Institute's GPCR-Based Drug Discovery conference examines how innovative biophysical, computational, and structural tools as well as advances in GPCR pathway knowledge are impacting GPCR-targeted drug discovery progress. Despite the longstanding role of GPCRs in the pharmaceutical industry, 'drugging' GPCRs has always been challenging because of their hallmark membrane-embedded structure and the varied but specific constellation of heterotrimeric G proteins to which each type of GPCR couples and signals through.

Tuesday, October 18

Registration and Morning Coffee (Grand Ballroom Foyer)7:00 am

ROOM LOCATION: Constitution B

GPCRs IN DISEASE

7:55 amWelcome Remarks
8:00 am

Chairperson's Remarks

Bethany L. Kormos, PhD, Associate Research Fellow, Medicine Design, Pfizer Inc.

8:05 am

FEATURED PRESENTATION: Case Study: A (Soon-to-be-Disclosed) GPCR Structure-Based Drug Design Project

Huixian Wu, PhD, Structural Biology Lab Head, Discovery Sciences, Medicine Design, Pfizer Worldwide Research & Development

Containing more than 800 members, the GPCR superfamily comprises nearly 150 validated drug targets which account for 1/3 of the FDA-approved drugs to date. Drug discovery targeting GPCRs continues to be an important focus in pharmaceutical industry and SBDD has been proven to be an enabling approach to accelerating early discovery programs to lead development and candidate selection. A recent example in Pfizer discovery will be shared in this talk.

8:35 am

CryoEM and Design of Novel mu Opioid Modulators

Susruta Majumdar, PhD, Associate Professor, Clinical Pharmacology, St. Louis College of Pharmacy, University of Washington

Sodium acts as a negative allosteric modulator at numerous GPCRs. We used a structure-based approach on the fentanyl template to rationally target the sodium site in the mu opioid receptor. We solved cryoEM structures of lead bitopics highlighting key interactions in the Na+-binding pocket. Lead bitopic showed a unique Gi/o/z signaling fingerprint compared to other opioids and was found to be analgesic devoid of some classical MOR adverse effects.

9:05 am

Impact of Oligomerization on Apelin Receptor Structure and Signaling

Michael Hanson, PhD, Co-Founder and Scientific Advisor, Structure Therapeutics

The apelin receptor is an important target for pulmonary fibrosis and heart failure. Agonists for APJR are at various stages of clinical investigation. Here we capture a snapshot of the GPCR monomer-dimer in equilibrium. We show how to manipulate this dynamic process through mutagenesis and link the oligomeric state to downstream efficacy properties. This analysis will open new opportunities for understanding how the oligomeric state of GPCRs influences pharmacology

Grand Opening Coffee Break in the Exhibit Hall with Poster Viewing (Grand Ballroom)9:35 am

NEWER APPROACHES FOR TARGETING GPCRs

10:25 am

Structure-Based Screening of Chemical Spaces for GPCR Hit Discovery

Anastasiia Sadybekov, PhD, Research Scientist, Laboratory of Seva Katritch, The Bridge Institute, University of Southern California

Drug discovery has recently been revolutionized by the abundance of target 3D structures and the development of ultra-large libraries of drug-like compounds. Inspired by the fragment screening concept, we have developed V-SYNTHES, a new iterative synthon-based approach for fast structure-based virtual screening of billions of readily available (REAL) compounds (Sadybekov et al. Nature 2022). I discuss the latest developments and applications of V-SYNTHES technology to fragment-based lead discovery, especially against GPCRs.

10:55 am

NMR Applications for GPCR-Based Drug Discovery

Matthew T. Eddy, PhD, Assistant Professor, Chemistry, University of Florida, Gainesville

We present biophysical data investigating the role of endogenous phospholipids as allosteric modulators of GPCR signaling. We find that lipids influence the function-related conformational dynamics of GPCRs to the same, or greater, extent as orthosteric drugs. We will discuss experimental NMR data of a protypical class A human GPCR that provide a mechanism for the influence of phospholipids on signaling complex formation.

11:25 am

GPCR Biased Agonists from DNA-Encoded Libraries

Casey J. Krusemark, PhD, Associate Professor, Medicinal Chemistry & Molecular Pharmacology, Purdue University

We present novel approaches for the direct selection of molecules from DNA-encoded libraries that activate GPCRs via either the G-protein or arrestin signaling pathways. We present results of discovery of biased agonists from DELs with live cell selections against the opioid receptor family.

11:55 am Identification of Novel Peptide Leads against GPCRs Using the Orbit Discovery Display Platform

Simon Bushell, PhD, Head of Structural Biology, Orbit Discovery

The Orbit Platform utilises a bead-based DNA-encoded display system to screen peptide libraries against difficult protein targets, including GPCRs. The platform is universal and can be used for FACS-based affinity screening against recombinant target protein, as well as functional screening against single target-overexpressing reporter cells via our unique microfluidics-based approach. Here, we demonstrate the capabilities of the Orbit platform by identifying novel peptide leads which bind and activate the Melanocortin-4 Receptor

Enjoy Lunch on Your Own12:25 pm

GPCR COMPLEXES AND COMPLEXITIES

1:25 pm

Chairperson's Remarks

Pedro Serrano Navarro, PhD, Principal Scientist, Structural Biology & Biophysics, Takeda San Diego

1:30 pm

Molecular Mechanism of the Wake-Promoting Agent TAK-925

Aaron McGrath, PhD, Senior Scientist, Structural Biology, Takeda, San Diego

Antagonism of the OX2 orexin receptor (OX2R) is a proven therapeutic strategy for insomnia drugs, and agonism of OX2R is a potentially powerful approach for narcolepsy type 1, which is characterized by the death of orexinergic neurons. Using cryo-EM, we determine how the first clinically tested OX2R agonist TAK-925 can activate OX2R in a highly selective manner. Structures of TAK-925-bound OX2R with either a Gq mimetic or Gi reveal that TAK-925 binds at the same site occupied by antagonists yet interacts with the transmembrane helices to trigger activating micro switches. The mechanisms of TAK-925's binding, activation, and selectivity will be discussed.

2:00 pm

Exploring Structure-Kinetic Relationships for Drugs Binding GPCRs

David A. Sykes, PhD, Senior Experimental Officer, Center of Membrane Proteins & Receptors, Nottingham University Hospitals National Health Service Trust

The physicochemical properties of drugs influence their measured binding kinetics. Drug association-rate enhancing effects can occur through hydrophobic and polar interactions with membrane-like structures. Crucial interactions at the extracellular surfaces of receptors occur via contact with specific amino acids in vestibular regions. Rapid water loss likely contributes to a fast on-rate, while complimentary structural features dictate the strength of the interaction in the orthosteric pocket and influence dissociation rates.

2:30 pm Multispan, Your Partner for Drug Discovery Research

Lisa Minor, PhD, Business Development, Multispan, Inc.

Multispan brings collaborative approach, dedication to research, commitment to quality, and deep expertise to help you succeed in drug discovery research for GPCRs and beyond. Empowered by 500+ functionally validated MULTISCREEN™ stable cell lines, new chemotypes can now be profiled in our 32-GPCR safety/liability panel for central nervous, cardiac, pulmonary and GI toxicity, while new targets and MOAs can be discovered in the our custom and 231-GPCR panels. With tools such as β-Arrestin-expressing BacMam viral particles and parental stable cell line clones, oGPCRs can be tested transiently, quickly, and “tagless” for proof-of-concept. To take advantage of CRISPR’s unlimited potential to accelerate drug discovery from target ID, through HTS, LO to pre-clinical studies, Multispan aims to bring your CRISPR initiatives to fruition by leveraging its two-decade long practical experience in cell line engineering, assays and HTS.

Refreshment Break in the Exhibit Hall with Poster Viewing (Grand Ballroom)3:00 pm

3:40 pm

Single-Molecule Flourescence for GPCRs

Rajan Lamichhane, PhD, Assistant Professor, Biochemistry & Cellular and Molecular Biology, University of Tennessee at Knoxville

The dynamic nature of GPCRs enables to recognize a wide range of extracellular molecules. While the structures of some GPCR conformers have been characterized, the dynamics of these conformations are mostly unknown. The lack of such knowledge limits our ability to develop drugs with precise therapeutic effects. Single-molecule fluorescence helps to visualize the dynamic behavior of GPCRs, which reveals hidden structural characteristics and provides new insights into GPCR functions.

4:10 pm

Proximity-Labeling Proteomics: Defining Receptor Interactions beyond What is Currently Known

Thomas Shroka, PhD Candidate, Laboratory of Tracy Handel, Biomedical Sciences, University of California, San Diego

Following GPCR activation, there is a dogmatic view on the subsequent interactions and pathways which result in the ultimate fate of a receptor. Although the key players cannot be ignored (i.e. G proteins, GRKS, β-arrestin, etc.) it is increasingly clear that the interactome of GPCRs is far more complex. Here I present ongoing work highlighting the need for and efforts towards better understanding these non-canonical interactions and pathways.

4:40 pm

The Discovery of Agonistic Therapeutic Antibodies against GPCRs

Christel Menet, PhD, CSO, Confo Therapeutics

ConfoBodies, single-domain antibody fragments from camelids (VHH) stabilize a desired conformational state of a GPCR and enable conformation-directed drug screening. We will show the unique potential of ConfoBody-stabilized GPCR conformations to facilitate de novo discovery of therapeutic antibodies exhibiting full agonist pharmacology to human GPCRs.

Interactive Discussions5:10 pm

Interactive Discussions are informal, moderated discussions, allowing participants to exchange ideas and experiences and develop future collaborations around a focused topic. Each discussion will be led by a facilitator who keeps the discussion on track and the group engaged. To get the most out of this format, please come prepared to share examples from your work, be a part of a collective, problem-solving session, and participate in active idea sharing. Please visit the conference website's Interactive Discussions page for a complete listing of topics and descriptions.

IN-PERSON INTERACTIVE DISCUSSION:

Facilitating GPCR-Targeted Discovery

Elisa Barile, PhD, Principal Scientist, Structural Biology & Biophysics, Takeda, San Diego

Matthew T. Eddy, PhD, Assistant Professor, Chemistry, University of Florida, Gainesville

  • NMR and other biophysical approaches for GPCRs  
  • Implications of CryoEM advances to GPCR-targeted drug discovery 
  • Other innovations for GPCR translational work​​

Welcome Reception in the Exhibit Hall with Poster Viewing (Grand Ballroom)5:55 pm

Close of Day6:55 pm

Wednesday, October 19

Registration and Morning Coffee (Grand Ballroom Foyer)7:30 am

ROOM LOCATION: Constitution B

TARGETING GPCRs IN THE TUMOR MICRO-ENVIRONMENT

7:55 am

Chairperson's Remarks

Nicolas Villanueva, MBA, PhD, Director, Bioscience Strategy, Dassault Systèmes BIOVIA

8:00 am

Discovery of Etrumandenant: A Potent Dual Adenosine Receptor Antagonist for Cancer Immunotherapy

Brandon Rosen, PhD, Senior Scientist, Medicinal Chemistry, Arcus Biosciences

The presence of extracellular adenosine is frequently responsible for the creation of an immunosuppressed tumor microenvironment through activation of the A2a and A2b receptors expressed on intratumoral immune cells. AB928 (etrumadenant) is a novel, selective, and non-brain penetrant small molecule dual A2aR/A2bR antagonist designed to potently block the immunosuppressive effects of high concentrations of adenosine in the tumor microenvironment. This presentation discusses the design, characterization, and SAR of a series of potent A2aR/A2bR antagonists culminating in the discovery of etrumadenant.

8:30 am Data Organization Using CDD Vault to Streamline the Discovery Process

Kelly Bachovchin, PhD, Customer Engagement Scientist, Technical Support, Collaborative Drug Discovery

Collaborative Drug Discovery (CDD) provides a whole solution for today’s biological and chemical data needs, differentiated by ease-of-use and superior collaborative capabilities.  CDD Vault® software includes Activity & Registration, Visualization, Inventory, and ELN capabilities.   Researchers can archive, mine, and securely collaborate within CDD Vault.  Collaborative hypothesis generation and evaluation allow multiple perspectives for multi-parameter optimization for all types of entities.

8:45 am Kinetic Characterization of Ligand and Antibody Binding to Cell Surface Expressed CCRL2 Using Surface Plasmon Resonance Microscopy (SPRM)

Jonathan Brooks, Inflammation & Remodeling Department, Pfizer Inc.

C-C motif chemokine receptor-like 2 (CCRL2), is a non-signaling 7TM receptor, referred to as an atypical chemokine receptor (ACKR).  Unlike conventional GPCR chemoattractants which initiate intracellular signaling to direct leukocyte migration, ACKRs are unable to activate G-protein-dependent signaling and the cellular responses required to direct cell migration. We utilized a new biophysical technique, SPR Microscopy, in addition to other biophysical techniques, to characterize ligand and antibody binding to CCRL2.

 

9:00 am

Targeting the Chemokine Receptor CCR2 in Immuno-Oncology: Opportunities and Challenges

Irina Kufareva, PhD, Associate Adjunct Professor, University of California, San Diego

Due to its role in immune cell trafficking, CCR2 is pursued as a target in autoimmunity and immuno-oncology. This pursuit, however, has not yet yielded any clinical candidates. Failures have been attributed to complexities of CCR2 biology and suboptimal properties of the therapeutic candidates. I will present an overview of CCR2-targeting modalities, discuss the structural principles of their affinity and selectivity, and share recent findings about unexpected side-effects of CCR2 inhibition.

9:30 am

FLX475: A Potent and Selective CCR4 Antagonist to Target Treg Selectively in the TME

David J. Wustrow, PhD, Senior Vice President Discovery & Preclinical Development, Discovery & Preclinical Development, RAPT Therapeutics

High levels of Treg infiltration in the tumor microenvironment (TME) lead to a poor prognosis in patients. The chemokine receptor CCR4 is highly expressed on Treg where it functions to attract them into the TME where they inhibit immune response. To reduce the prevalence of Treg in the TME we have discovered and developed FLX475 a potent, selective, and orally available CCR4 antagonist.

Coffee Break in the Exhibit Hall with Poster Viewing (Grand Ballroom)10:00 am

PLENARY KEYNOTE PROGRAM

ROOM LOCATION: Constitution A + B

11:00 am

Plenary Chairperson’s Remarks

An-Dinh Nguyen, Team Lead, Discovery on Target, Cambridge Healthtech Institute

11:05 am

PLENARY: Pirating Biology to Detect and Degrade Extracellular Proteins

James A. Wells, PhD, Professor, Departments of Pharmaceutical Chemistry and Cellular & Molecular Pharmacology, University of California, San Francisco

In contrast to intracellular PROTACs, approaches to degrade extracellular proteins are just emerging. I’ll describe our recent progress to harness natural mechanisms such as transmembrane E3 ligases to degrade extracellular proteins using fully genetically encoded bispecific antibodies we call AbTACs. We have also engineered a peptide ligase which can be tethered to cells to detect proteolysis events and target them with recombinant antibodies for greater selectivity for the tumor microenvironment.

11:50 am

PLENARY: Therapeutic Modalities for Neuroscience Diseases

Anabella Villalobos, PhD, Senior Vice President, Biotherapeutics & Medicinal Sciences, Biogen

Many effective medicines exist to treat neurological diseases, but medical need remains high. We have a unique multi-modality approach to discover novel therapies and our goal is to find the best modality regardless of biological target. With a multi-modality approach, we aim to expand target space, leverage synergies across modalities, and offer options to patients. Opportunities and challenges associated with small molecules, biologics, oligonucleotides, and gene therapy will be discussed.

Enjoy Lunch on Your Own12:35 pm

Refreshment Break in the Exhibit Hall with Poster Viewing (Grand Ballroom Foyer)1:25 pm

Close of GPCR-Based Drug Discovery Conference2:05 pm